PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004486757.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 338aa    MW: 37212.3 Da    PI: 6.7578
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004486757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.90.000432042421255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_004486757.1 204 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 242
                     6677889999999999998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.439192241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-7202252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.26E-6202246No hitNo description
SuperFamilySSF474593.14E-10202253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MMAGNPNWWS MHPPPSLNIP SQYVLGSSSI PFNSLTENSE TPHSWSQLLF TGLPGEEERV  60
GFNHFEANKS SENWDVQIMN PCSRVSPNTI MDVIKQEVCQ SGNMYGEDQF HHHHHHHHAS  120
SSGLIGSSNW SHMVPVSSPI STSHVTSLSS SSDNMLDFTY NKVDHRNNNP LPTDQISECN  180
SSTIGVNKKA RVQPSSSQPP LKVRKEKLGD RITALHQLVS PFGKTDTASV LLEAIGYIRF  240
LQSQIEALSS PYLDTASKNM RNQHSVHVER NSVFPEDPGQ LLDDTGLKRK GAPNQNAEGN  300
KAKDLRSRGL CLVPVSCTQN VGSENGADYW APAFGSGF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1495450.0BT149545.1 Medicago truncatula clone JCVI-FLMt-16P10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004486757.10.0PREDICTED: transcription factor bHLH68-like
SwissprotQ8S3D15e-74BH068_ARATH; Transcription factor bHLH68
TrEMBLG7IUP40.0G7IUP4_MEDTR; BHLH transcription factor-like protein
STRINGGLYMA07G02120.41e-150(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12233379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-73bHLH family protein